Journal: Surface and Coatings Technology

Article Title: Comparison of HIPIMS sputtered Ag- and Cu-surfaces leading to accelerated bacterial inactivation in the dark

doi: 10.1016/j.surfcoat.2014.02.029

Figure Lengend Snippet: Fig. 4. E. coli inactivation as a function of time for Ag-polyester sputtered at 5 A for different times in the dark.

Article Snippet: The samples of Escherichia coli (E. coli K12) was obtained from the Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ) ATCC23716, Braunschweig, Germany, to test the antibacterial activity of the Ag and Cu sputtered samples.

Techniques:

Journal: Scientific Reports

Article Title: Stimulation of carbon nanomaterials on syntrophic oxidation of butyrate in sediment enrichments and a defined coculture

doi: 10.1038/s41598-018-30745-7

Figure Lengend Snippet: Effects of the addition of CNTs and rGO on the CH 4 production ( a ) and acetate production ( b ), butyrate degradation ( c ) and butyrate degradation rate ( d ) in the defined coculture of S . wolfei with M . mariplaudis . Results are the mean and standard deviation for triplicate incubations. Different letters indicate significant differences (Duncan’s test, P < 0.05).

Article Snippet: Syntrophomonas wolfei (DSM102351) and Methanococcus maripaludis (DSM14266) were purchased from German culture collection DSMZ (Braunschweig, Germany).

Techniques: Standard Deviation

Journal: Scientific Reports

Article Title: Stimulation of carbon nanomaterials on syntrophic oxidation of butyrate in sediment enrichments and a defined coculture

doi: 10.1038/s41598-018-30745-7

Figure Lengend Snippet: FISH ( a , b ) and SEM ( c , d ) images of the defined coculture of S . wolfei with M . mariplaudis in the presence of CNTs ( a , c ) and rGO ( b , d ). The concentrations of CNTs and rGO are 2 g L −1 and 0.1 g L −1 , respectively. For the FISH images, red color indicates bacterial cell and green color indicates archaeal cell.

Article Snippet: Syntrophomonas wolfei (DSM102351) and Methanococcus maripaludis (DSM14266) were purchased from German culture collection DSMZ (Braunschweig, Germany).

Techniques:

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Outline of the experiments performed in this study.

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: Bacteria, Sedimentation

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Diatom cell concentration in growth experiment 2 with axenic Minutocellus polymorphus ( a ) and diatom and bacteria cell concentration in co-culture treatments with M. polymorphus and the addition of Pseudoalteromonas carrageenovora ( b ) or Vibrio thalassae ( c ), as well as total volume of suspended micro-aggregates ( d ) and transparent exopolymeric particle (TEP) concentrations ( e ) in all treatments. Symbols and error bars denote the means and standard deviations of triplicate treatments.

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: Concentration Assay, Bacteria, Co-Culture Assay

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Epifluorescence microscopy images of axenic Minutocellus polymorphus ( a , b ) and co-cultures of M. polymorphus and Marinobacter adhaerens HP15 ( c , d ), Vibrio thalassae ( e , f ), and Pseudoalteromonas carrageenovora ( g , h ) under blue ( a , c , e , g ) and UV ( b , d , f , h ) excitation wavelengths. Images were taken during the exponential phases of growth. Red: chlorophyll- a autofluorescence, blue: DAPI-bound nucleic acids. White arrows: diatom-attached bacteria; blue arrows: bacterial aggregates. Amorphous material is considered TEP.

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: Epifluorescence Microscopy, Bacteria

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Transparent exopolymeric particle (TEP) production, TEP concentration normalized to diatom cell abundance, and volume of suspended micro-aggregates during the exponential, stationary, and decline growth phases of Minutocellus polymorphus in axenic cultures and in co-cultures with Marinobacter adhaerens HP15, Vibrio thalassae , or Pseudoalteromonas carrageenovora .

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: Concentration Assay

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Abundance of aggregates formed in roller tank experiments inoculated to lower total cell abundances (10 3 cells mL −1 ).

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: Sedimentation

Journal: ISME Communications

Article Title: Particle-associated bacteria differentially influence the aggregation of the marine diatom Minutocellus polymorphus

doi: 10.1038/s43705-022-00146-z

Figure Lengend Snippet: Number of visible sinking aggregates formed in roller tanks with axenic Minutocellus polymorphus , and M. polymorphus with the addition of 2.5 µm silica beads , Marinobacter adhaerens HP15, Vibrio thalassae , or Pseudoalteromonas carrageenovora in the low cell abundance experiments ( a ca. 10 cells mL −1 ; Table ) and of axenic M. polymorphus and M. polymorphus with the addition of M. adhaerens in the high cell abundance experiments ( b 10 5 cells mL −1 ; Table ). Lowercase letters indicate significant differences between treatments.

Article Snippet: Stock cultures of Vibrio thalassae (DSM102810, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH), Pseudoalteromonas carrageenovora (DSM6820, DSMZ), and Marinobacter adhaerens HP15 [ ] were maintained on Marine Agar (BD Difco 2216, Becton Dickinson, NJ; ZoBell, 1941) plates at 23 ± 1 °C.

Techniques: